PoplarV1, Main, Exploration, bibRecord, 000883

Indole-3-acetic acid has long-term effects on long non-coding RNA gene methylation and growth in Populus tomentosa.

Identifieur interne : 000883 ( Main/Exploration ); précédent : 000882; suivant : 000884

Indole-3-acetic acid has long-term effects on long non-coding RNA gene methylation and growth in Populus tomentosa.

Auteurs : Dong Ci [République populaire de Chine] ; Min Tian [République populaire de Chine] ; Yuepeng Song [République populaire de Chine] ; Qingzhang Du [République populaire de Chine] ; Mingyang Quan [République populaire de Chine] ; Anran Xuan [République populaire de Chine] ; Jianyuan Yu [République populaire de Chine] ; Zixuan Yuan [République populaire de Chine] ; Deqiang Zhang [République populaire de Chine]

Source :

Molecular genetics and genomics : MGG [ 1617-4623 ] ; 2019.

RBID : pubmed:31324970

Descripteurs français

KwdFr :
- ARN long non codant (génétique), ARN long non codant (métabolisme), Acides indolacétiques (pharmacologie), Facteur de croissance végétal (pharmacologie), Méthylation de l'ADN (effets des médicaments et des substances chimiques), Paroi cellulaire (métabolisme), Photosynthèse (effets des médicaments et des substances chimiques), Populus (croissance et développement), Populus (effets des médicaments et des substances chimiques), Populus (génétique), Populus (métabolisme), Régulation de l'expression des gènes végétaux (effets des médicaments et des substances chimiques), microARN (métabolisme).
MESH :
- croissance et développement : Populus.
- effets des médicaments et des substances chimiques : Méthylation de l'ADN, Photosynthèse, Populus, Régulation de l'expression des gènes végétaux.
- génétique : ARN long non codant, Populus.
- métabolisme : ARN long non codant, Paroi cellulaire, Populus, microARN.
- pharmacologie : Acides indolacétiques, Facteur de croissance végétal.

English descriptors

KwdEn :
- Cell Wall (metabolism), DNA Methylation (drug effects), Gene Expression Regulation, Plant (drug effects), Indoleacetic Acids (pharmacology), MicroRNAs (metabolism), Photosynthesis (drug effects), Plant Growth Regulators (pharmacology), Populus (drug effects), Populus (genetics), Populus (growth & development), Populus (metabolism), RNA, Long Noncoding (genetics), RNA, Long Noncoding (metabolism).
MESH :
- chemical , genetics : RNA, Long Noncoding.
- chemical , metabolism : MicroRNAs, RNA, Long Noncoding.
- chemical , pharmacology : Indoleacetic Acids, Plant Growth Regulators.
- drug effects : DNA Methylation, Gene Expression Regulation, Plant, Photosynthesis, Populus.
- genetics : Populus.
- growth & development : Populus.
- metabolism : Cell Wall, Populus.

Abstract

DNA methylation and long non-coding RNAs (lncRNAs) regulate plant growth and development, but their relationship and effect on responses to the auxin phytohormone indole-3-acetic acid (IAA) remain largely unknown, particularly in woody plants such as poplar (Populus tomentosa). Following treatment of 1-year-old clonal plants with 100 µM IAA, key poplar lncRNA genes showed changes in methylation, but whole-genome methylation levels showed no significant change. Moreover, 100 µM IAA inhibited growth of the 1-year-old poplar clones, possibly through the suppression of photosynthesis. This inhibition had a long-term effect, persisting at 1 month after removal of the exogenous IAA. Transcriptome analysis identified two candidate lncRNA genes that show changes in expression following IAA treatment, TCONS_00003480 and TCONS_00004832. TCONS_00003480 contains the same microRNA target sites of ptc-miR6464 as the 4-coumarate: CoA ligase 2 transcript, which encodes a lignin biosynthesis enzyme. And TCONS_00004832 shares the same target sites of ptc-miR6437a with the Photosystem II reaction center protein D and Cytochrome C Oxidase 17 transcripts, which are related to photosynthesis. The two lncRNAs as the mimics to corresponding target genes of miRNAs to prevent them from degrading. Examination of lncRNA gene expression and methylation revealed a negative relationship (r = - 0.29, P < 0.05); moreover, hypermethylation of the two candidate lncRNA genes remained 1 month after IAA treatment, suggesting that changes in methylation might be involved in the long-term effects of plant hormones. Therefore, our study reveals a long-term effect of IAA on the growth of P. tomentosa, possibly via methylation-mediated epigenetic changes in lncRNA gene expression and the interaction with corresponding miRNAs, leading to regulation of genes related to photosynthesis and growth.

DOI: 10.1007/s00438-019-01593-5
PubMed: 31324970

Affiliations:

République populaire de Chine

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000784
to stream Main, to step Curation: 000784

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Indole-3-acetic acid has long-term effects on long non-coding RNA gene methylation and growth in Populus tomentosa.</title>
<author><name sortKey="Ci, Dong" sort="Ci, Dong" uniqKey="Ci D" first="Dong" last="Ci">Dong Ci</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Tian, Min" sort="Tian, Min" uniqKey="Tian M" first="Min" last="Tian">Min Tian</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Song, Yuepeng" sort="Song, Yuepeng" uniqKey="Song Y" first="Yuepeng" last="Song">Yuepeng Song</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Du, Qingzhang" sort="Du, Qingzhang" uniqKey="Du Q" first="Qingzhang" last="Du">Qingzhang Du</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Quan, Mingyang" sort="Quan, Mingyang" uniqKey="Quan M" first="Mingyang" last="Quan">Mingyang Quan</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Xuan, Anran" sort="Xuan, Anran" uniqKey="Xuan A" first="Anran" last="Xuan">Anran Xuan</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Yu, Jianyuan" sort="Yu, Jianyuan" uniqKey="Yu J" first="Jianyuan" last="Yu">Jianyuan Yu</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Yuan, Zixuan" sort="Yuan, Zixuan" uniqKey="Yuan Z" first="Zixuan" last="Yuan">Zixuan Yuan</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China. DeqiangZhang@bjfu.edu.cn.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>Xining Forestry Science Research Institute, No. 18-2, Haihu Avenue Chengbei District, Xining, 810003, Qinghai, People's Republic of China. DeqiangZhang@bjfu.edu.cn.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Xining Forestry Science Research Institute, No. 18-2, Haihu Avenue Chengbei District, Xining, 810003, Qinghai</wicri:regionArea>
<wicri:noRegion>Qinghai</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2019">2019</date>
<idno type="RBID">pubmed:31324970</idno>
<idno type="pmid">31324970</idno>
<idno type="doi">10.1007/s00438-019-01593-5</idno>
<idno type="wicri:Area/Main/Corpus">000784</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000784</idno>
<idno type="wicri:Area/Main/Curation">000784</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000784</idno>
<idno type="wicri:Area/Main/Exploration">000784</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Indole-3-acetic acid has long-term effects on long non-coding RNA gene methylation and growth in Populus tomentosa.</title>
<author><name sortKey="Ci, Dong" sort="Ci, Dong" uniqKey="Ci D" first="Dong" last="Ci">Dong Ci</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Tian, Min" sort="Tian, Min" uniqKey="Tian M" first="Min" last="Tian">Min Tian</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Song, Yuepeng" sort="Song, Yuepeng" uniqKey="Song Y" first="Yuepeng" last="Song">Yuepeng Song</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Du, Qingzhang" sort="Du, Qingzhang" uniqKey="Du Q" first="Qingzhang" last="Du">Qingzhang Du</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Quan, Mingyang" sort="Quan, Mingyang" uniqKey="Quan M" first="Mingyang" last="Quan">Mingyang Quan</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Xuan, Anran" sort="Xuan, Anran" uniqKey="Xuan A" first="Anran" last="Xuan">Anran Xuan</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Yu, Jianyuan" sort="Yu, Jianyuan" uniqKey="Yu J" first="Jianyuan" last="Yu">Jianyuan Yu</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Yuan, Zixuan" sort="Yuan, Zixuan" uniqKey="Yuan Z" first="Zixuan" last="Yuan">Zixuan Yuan</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name>
<affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China. DeqiangZhang@bjfu.edu.cn.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083</wicri:regionArea>
<wicri:noRegion>100083</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>Xining Forestry Science Research Institute, No. 18-2, Haihu Avenue Chengbei District, Xining, 810003, Qinghai, People's Republic of China. DeqiangZhang@bjfu.edu.cn.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Xining Forestry Science Research Institute, No. 18-2, Haihu Avenue Chengbei District, Xining, 810003, Qinghai</wicri:regionArea>
<wicri:noRegion>Qinghai</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series><title level="j">Molecular genetics and genomics : MGG</title>
<idno type="eISSN">1617-4623</idno>
<imprint><date when="2019" type="published">2019</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Cell Wall (metabolism)</term>
<term>DNA Methylation (drug effects)</term>
<term>Gene Expression Regulation, Plant (drug effects)</term>
<term>Indoleacetic Acids (pharmacology)</term>
<term>MicroRNAs (metabolism)</term>
<term>Photosynthesis (drug effects)</term>
<term>Plant Growth Regulators (pharmacology)</term>
<term>Populus (drug effects)</term>
<term>Populus (genetics)</term>
<term>Populus (growth & development)</term>
<term>Populus (metabolism)</term>
<term>RNA, Long Noncoding (genetics)</term>
<term>RNA, Long Noncoding (metabolism)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ARN long non codant (génétique)</term>
<term>ARN long non codant (métabolisme)</term>
<term>Acides indolacétiques (pharmacologie)</term>
<term>Facteur de croissance végétal (pharmacologie)</term>
<term>Méthylation de l'ADN (effets des médicaments et des substances chimiques)</term>
<term>Paroi cellulaire (métabolisme)</term>
<term>Photosynthèse (effets des médicaments et des substances chimiques)</term>
<term>Populus (croissance et développement)</term>
<term>Populus (effets des médicaments et des substances chimiques)</term>
<term>Populus (génétique)</term>
<term>Populus (métabolisme)</term>
<term>Régulation de l'expression des gènes végétaux (effets des médicaments et des substances chimiques)</term>
<term>microARN (métabolisme)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Long Noncoding</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>MicroRNAs</term>
<term>RNA, Long Noncoding</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="pharmacology" xml:lang="en"><term>Indoleacetic Acids</term>
<term>Plant Growth Regulators</term>
</keywords>
<keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="drug effects" xml:lang="en"><term>DNA Methylation</term>
<term>Gene Expression Regulation, Plant</term>
<term>Photosynthesis</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="effets des médicaments et des substances chimiques" xml:lang="fr"><term>Méthylation de l'ADN</term>
<term>Photosynthèse</term>
<term>Populus</term>
<term>Régulation de l'expression des gènes végétaux</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN long non codant</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Cell Wall</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>ARN long non codant</term>
<term>Paroi cellulaire</term>
<term>Populus</term>
<term>microARN</term>
</keywords>
<keywords scheme="MESH" qualifier="pharmacologie" xml:lang="fr"><term>Acides indolacétiques</term>
<term>Facteur de croissance végétal</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">DNA methylation and long non-coding RNAs (lncRNAs) regulate plant growth and development, but their relationship and effect on responses to the auxin phytohormone indole-3-acetic acid (IAA) remain largely unknown, particularly in woody plants such as poplar (Populus tomentosa). Following treatment of 1-year-old clonal plants with 100 µM IAA, key poplar lncRNA genes showed changes in methylation, but whole-genome methylation levels showed no significant change. Moreover, 100 µM IAA inhibited growth of the 1-year-old poplar clones, possibly through the suppression of photosynthesis. This inhibition had a long-term effect, persisting at 1 month after removal of the exogenous IAA. Transcriptome analysis identified two candidate lncRNA genes that show changes in expression following IAA treatment, TCONS_00003480 and TCONS_00004832. TCONS_00003480 contains the same microRNA target sites of ptc-miR6464 as the 4-coumarate: CoA ligase 2 transcript, which encodes a lignin biosynthesis enzyme. And TCONS_00004832 shares the same target sites of ptc-miR6437a with the Photosystem II reaction center protein D and Cytochrome C Oxidase 17 transcripts, which are related to photosynthesis. The two lncRNAs as the mimics to corresponding target genes of miRNAs to prevent them from degrading. Examination of lncRNA gene expression and methylation revealed a negative relationship (r = - 0.29, P < 0.05); moreover, hypermethylation of the two candidate lncRNA genes remained 1 month after IAA treatment, suggesting that changes in methylation might be involved in the long-term effects of plant hormones. Therefore, our study reveals a long-term effect of IAA on the growth of P. tomentosa, possibly via methylation-mediated epigenetic changes in lncRNA gene expression and the interaction with corresponding miRNAs, leading to regulation of genes related to photosynthesis and growth.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">31324970</PMID>
<DateCompleted><Year>2019</Year>
<Month>11</Month>
<Day>11</Day>
</DateCompleted>
<DateRevised><Year>2019</Year>
<Month>11</Month>
<Day>11</Day>
</DateRevised>
<Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1617-4623</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>294</Volume>
<Issue>6</Issue>
<PubDate><Year>2019</Year>
<Month>Dec</Month>
</PubDate>
</JournalIssue>
<Title>Molecular genetics and genomics : MGG</Title>
<ISOAbbreviation>Mol Genet Genomics</ISOAbbreviation>
</Journal>
<ArticleTitle>Indole-3-acetic acid has long-term effects on long non-coding RNA gene methylation and growth in Populus tomentosa.</ArticleTitle>
<Pagination><MedlinePgn>1511-1525</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1007/s00438-019-01593-5</ELocationID>
<Abstract><AbstractText>DNA methylation and long non-coding RNAs (lncRNAs) regulate plant growth and development, but their relationship and effect on responses to the auxin phytohormone indole-3-acetic acid (IAA) remain largely unknown, particularly in woody plants such as poplar (Populus tomentosa). Following treatment of 1-year-old clonal plants with 100 µM IAA, key poplar lncRNA genes showed changes in methylation, but whole-genome methylation levels showed no significant change. Moreover, 100 µM IAA inhibited growth of the 1-year-old poplar clones, possibly through the suppression of photosynthesis. This inhibition had a long-term effect, persisting at 1 month after removal of the exogenous IAA. Transcriptome analysis identified two candidate lncRNA genes that show changes in expression following IAA treatment, TCONS_00003480 and TCONS_00004832. TCONS_00003480 contains the same microRNA target sites of ptc-miR6464 as the 4-coumarate: CoA ligase 2 transcript, which encodes a lignin biosynthesis enzyme. And TCONS_00004832 shares the same target sites of ptc-miR6437a with the Photosystem II reaction center protein D and Cytochrome C Oxidase 17 transcripts, which are related to photosynthesis. The two lncRNAs as the mimics to corresponding target genes of miRNAs to prevent them from degrading. Examination of lncRNA gene expression and methylation revealed a negative relationship (r = - 0.29, P < 0.05); moreover, hypermethylation of the two candidate lncRNA genes remained 1 month after IAA treatment, suggesting that changes in methylation might be involved in the long-term effects of plant hormones. Therefore, our study reveals a long-term effect of IAA on the growth of P. tomentosa, possibly via methylation-mediated epigenetic changes in lncRNA gene expression and the interaction with corresponding miRNAs, leading to regulation of genes related to photosynthesis and growth.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Ci</LastName>
<ForeName>Dong</ForeName>
<Initials>D</Initials>
<AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Tian</LastName>
<ForeName>Min</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Song</LastName>
<ForeName>Yuepeng</ForeName>
<Initials>Y</Initials>
<AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Du</LastName>
<ForeName>Qingzhang</ForeName>
<Initials>Q</Initials>
<AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Quan</LastName>
<ForeName>Mingyang</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Xuan</LastName>
<ForeName>Anran</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Yu</LastName>
<ForeName>Jianyuan</ForeName>
<Initials>J</Initials>
<AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Yuan</LastName>
<ForeName>Zixuan</ForeName>
<Initials>Z</Initials>
<AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Zhang</LastName>
<ForeName>Deqiang</ForeName>
<Initials>D</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0002-8849-2366</Identifier>
<AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, No. 35, Qinghua East Road, Beijing, 100083, People's Republic of China. DeqiangZhang@bjfu.edu.cn.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Xining Forestry Science Research Institute, No. 18-2, Haihu Avenue Chengbei District, Xining, 810003, Qinghai, People's Republic of China. DeqiangZhang@bjfu.edu.cn.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<GrantList CompleteYN="Y"><Grant><GrantID>2015ZCQ-SW-01</GrantID>
<Agency>the Fundamental Research Funds for Central Universities</Agency>
<Country></Country>
</Grant>
<Grant><GrantID>31670333</GrantID>
<Agency>the Project of the National Natural Science Foundation of China</Agency>
<Country></Country>
</Grant>
</GrantList>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2019</Year>
<Month>07</Month>
<Day>19</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>Germany</Country>
<MedlineTA>Mol Genet Genomics</MedlineTA>
<NlmUniqueID>101093320</NlmUniqueID>
<ISSNLinking>1617-4623</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D007210">Indoleacetic Acids</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D035683">MicroRNAs</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D010937">Plant Growth Regulators</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D062085">RNA, Long Noncoding</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>6U1S09C61L</RegistryNumber>
<NameOfSubstance UI="C030737">indoleacetic acid</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D002473" MajorTopicYN="N">Cell Wall</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D019175" MajorTopicYN="Y">DNA Methylation</DescriptorName>
<QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018506" MajorTopicYN="Y">Gene Expression Regulation, Plant</DescriptorName>
<QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D007210" MajorTopicYN="N">Indoleacetic Acids</DescriptorName>
<QualifierName UI="Q000494" MajorTopicYN="Y">pharmacology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D035683" MajorTopicYN="N">MicroRNAs</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010788" MajorTopicYN="N">Photosynthesis</DescriptorName>
<QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010937" MajorTopicYN="N">Plant Growth Regulators</DescriptorName>
<QualifierName UI="Q000494" MajorTopicYN="Y">pharmacology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName>
<QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D062085" MajorTopicYN="N">RNA, Long Noncoding</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
</MeshHeadingList>
<KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">DNA methylation</Keyword>
<Keyword MajorTopicYN="N">IAA</Keyword>
<Keyword MajorTopicYN="N">Inhibition</Keyword>
<Keyword MajorTopicYN="N">Long-term effect</Keyword>
<Keyword MajorTopicYN="N">Populus tomentosa</Keyword>
<Keyword MajorTopicYN="N">lncRNAs</Keyword>
</KeywordList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="received"><Year>2019</Year>
<Month>03</Month>
<Day>02</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted"><Year>2019</Year>
<Month>07</Month>
<Day>05</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed"><Year>2019</Year>
<Month>7</Month>
<Day>22</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>2019</Year>
<Month>11</Month>
<Day>12</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez"><Year>2019</Year>
<Month>7</Month>
<Day>21</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList><ArticleId IdType="pubmed">31324970</ArticleId>
<ArticleId IdType="doi">10.1007/s00438-019-01593-5</ArticleId>
<ArticleId IdType="pii">10.1007/s00438-019-01593-5</ArticleId>
</ArticleIdList>
<ReferenceList><Reference><Citation>Cell Res. 2013 Nov;23(11):1256-69</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23938295</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 2012 Jul 6;150(1):12-27</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22770212</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ecotoxicol Environ Saf. 2016 Oct;132:329-38</Citation>
<ArticleIdList><ArticleId IdType="pubmed">27344401</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):6864-6869</Citation>
<ArticleIdList><ArticleId IdType="pubmed">29899148</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Anal Biochem. 1976 May 7;72:248-54</Citation>
<ArticleIdList><ArticleId IdType="pubmed">942051</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2018 Jan 4;46(D1):D133-D138</Citation>
<ArticleIdList><ArticleId IdType="pubmed">29069510</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2011 Sep 1;27(17):2325-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21697122</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2013 Feb;197(3):777-90</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23278123</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Protoc. 2012 Mar 01;7(3):562-78</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22383036</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2005 Oct;17(10):2676-92</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16126837</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2016 Mar;67(5):1477-92</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26712827</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>RNA. 2010 Aug;16(8):1478-87</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20587619</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2019 Apr;222(2):752-767</Citation>
<ArticleIdList><ArticleId IdType="pubmed">30582614</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Bioinformatics. 2012 Dec 13;13:331</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23237380</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2003 Nov;15(11):2730-41</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14555699</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2017 May 17;68(11):2899-2912</Citation>
<ArticleIdList><ArticleId IdType="pubmed">28498935</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Signal Behav. 2013 Apr;8(4):e23572</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23333979</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 2018 Jun 1;35(6):1422-1436</Citation>
<ArticleIdList><ArticleId IdType="pubmed">29554332</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>G3 (Bethesda). 2013 Nov 06;3(11):2069-84</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24048648</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 2009 Mar 20;136(6):1005-16</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19303845</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2007 Oct;52(2):263-85</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17727617</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2015 Jan;27(1):20-32</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25604445</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2007 Jul;35(Web Server issue):W345-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17631615</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Front Plant Sci. 2016 Jul 12;7:1003</Citation>
<ArticleIdList><ArticleId IdType="pubmed">27462332</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>G3 (Bethesda). 2017 Nov 6;7(11):3621-3635</Citation>
<ArticleIdList><ArticleId IdType="pubmed">28877971</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2006 Sep 15;313(5793):1596-604</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16973872</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Front Plant Sci. 2018 Jan 15;8:2263</Citation>
<ArticleIdList><ArticleId IdType="pubmed">29379516</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2016 Apr;67(8):2467-82</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26912799</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Plant Physiol. 2004 Nov;161(11):1225-34</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15602814</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Genet. 2009 Jun;5(6):e1000530</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19557164</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ann Bot. 2013 Jun;111(6):1021-58</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23558912</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2008 Nov 15;24(22):2657-63</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18434344</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Rev Genet. 2008 Jun;9(6):465-76</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18463664</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Int J Dev Biol. 2005;49(5-6):527-37</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16096962</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2011 Jul;62(11):3727-35</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21633082</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2016 Feb;67(3):723-37</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26552881</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Biol Chem. 2002 Oct 4;277(40):37741-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12124387</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Mol Biol. 2013 Dec;83(6):559-76</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23860796</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2010 Mar;185(4):1108-18</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20003072</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Genomics. 2018 Nov 6;19(1):805</Citation>
<ArticleIdList><ArticleId IdType="pubmed">30400813</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
<affiliations><list><country><li>République populaire de Chine</li>
</country>
</list>
<tree><country name="République populaire de Chine"><noRegion><name sortKey="Ci, Dong" sort="Ci, Dong" uniqKey="Ci D" first="Dong" last="Ci">Dong Ci</name>
</noRegion>
<name sortKey="Du, Qingzhang" sort="Du, Qingzhang" uniqKey="Du Q" first="Qingzhang" last="Du">Qingzhang Du</name>
<name sortKey="Quan, Mingyang" sort="Quan, Mingyang" uniqKey="Quan M" first="Mingyang" last="Quan">Mingyang Quan</name>
<name sortKey="Song, Yuepeng" sort="Song, Yuepeng" uniqKey="Song Y" first="Yuepeng" last="Song">Yuepeng Song</name>
<name sortKey="Tian, Min" sort="Tian, Min" uniqKey="Tian M" first="Min" last="Tian">Min Tian</name>
<name sortKey="Xuan, Anran" sort="Xuan, Anran" uniqKey="Xuan A" first="Anran" last="Xuan">Anran Xuan</name>
<name sortKey="Yu, Jianyuan" sort="Yu, Jianyuan" uniqKey="Yu J" first="Jianyuan" last="Yu">Jianyuan Yu</name>
<name sortKey="Yuan, Zixuan" sort="Yuan, Zixuan" uniqKey="Yuan Z" first="Zixuan" last="Yuan">Zixuan Yuan</name>
<name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name>
<name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarV1/Data/Main/Exploration

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000883 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000883 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    PoplarV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:31324970
   |texte=   Indole-3-acetic acid has long-term effects on long non-coding RNA gene methylation and growth in Populus tomentosa.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:31324970" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a PoplarV1

This area was generated with Dilib version V0.6.37.
Data generation: Wed Nov 18 12:07:19 2020. Site generation: Wed Nov 18 12:16:31 2020

	Serveur d'exploration sur le peuplier
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration sur le peuplier

Indole-3-acetic acid has long-term effects on long non-coding RNA gene methylation and growth in Populus tomentosa.

Indole-3-acetic acid has long-term effects on long non-coding RNA gene methylation and growth in Populus tomentosa.

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki